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Publications et thèses de 2013

Publications :

1. Interaction of cisplatin with adenine and guanine : a combined IRMPD, MS/MS and theoretical study.
- B. Chiavarino, M.-E. Crestoni, S. Fornarini, D. Scuderi, J.-Y. Salpin
- J. Am. Chem. Soc., 135, 1445-1455, 2013

1-bis. Correction to “Interaction of cisplatin with adenine and guanine : a combined IRMPD, MS/MS and theoretical study”.
- B. Chiavarino, M.-E. Crestoni, S. Fornarini, D. Scuderi, J.-Y. Salpin
- J. Am. Chem. Soc., 135(29), 10877-10877, 2013
- DOI :10.1021/ja405235n

2. Unimolecular reactivity of the [urea-Sr]2+ complex, a metastable dication in the gas phase. An experimental and theoretical perspective.
- A. Eizaguirre, O. Mó, M. Yáñez, J. Tortajada, J.-Y. Salpin
- J. Phys. Chem. B, 117, 2088-2095, 2013

3. Brassinosteroid signaling regulates cell fate specification during stomata development in Arabidopsis thaliana.
- M. Khan, W. Rozhon, J. Bigeard, D. Pflieger, S. Husar, A. Pitzschke, C. Jonak, H. Hirt, B. Poppenberger
- J. Biol. Chem., 288(11), 7519-27, 2013

4. Discrimination of cyclic and linear oligosaccharides by tandem mass spectrometry using collision-induced dissociation (CID), pulsed-Q-dissociation (PQD) and the higher-energy C-trap dissociation modes.
- C. Przybylski, V. Bonnet
- Rapid Commun. Mass Spectrom., 27(1), 75-87, 2013

5. HSulf sulfatases catalyze processive and oriented 6-O-desulfation of heparan sulfate that differentially regulates fibroblast growth factor activity.
- A. Seffouh, F. Milz, C. Przybylski, C. Laguri, A. Oosterhof, S. Bourcier, R. Sadir, E. Dutkowski, R. Daniel, T.H. van Kuppevelt, T. Dierks, H. Lortat-Jacob, R.R. Vivès
- FASEB J., 27(6), 2431-2439, 2013

6. Expression of recombinant human complement C1q allows identification of the C1r/C1s-binding sites.
- I. Bally, S. Ancelet, C. Moriscot, F. Gonnet, A. Mantovani, R. Daniel, G. Schoehn, G. J. Arlaud, N. Thielens
- Proc. Natl Acad. Sci. U S A, 110(21), 8650-8655, 2013

7. Gas-phase interactions of organotin compounds with glycine.
- L. Latrous, J. Tortajada, V. Haldys, E. Léon, C. Correia, J.-Y. Salpin
- J. Mass Spectrom., 48 (7), 795-806, 2013

8. Reactivity of lanthanoid mono-cations with ammonia : a combined inductively coupled plasma mass spectrometry, and computational investigation.
- A. Quemet, P. Vitorge, A. Cimas, S. Liu, J.-Y. Salpin, C. Marsden, J. Tortajada, L. Gagliardi, R. Spezia, M.-P. Gaigeot, R. Brennetot
- Int. J. Mass Spectrom., 334, 27-37, 2013

9. Gas-phase Collision Induced Dissociation mechanisms of a peptide model : A combined chemical dynamics and experimental study.
- D. Ortiz, P. Martin-Gago, A. Riera, K. Song, J.-Y. Salpin, R. Spezia
- Int. J. Mass Spectrom., 335, 33-44, 2013

10. Degradation of glyphosate and AMPA (amino methylphosphonic acid) solution by thin films of birnessite electrodeposited : a new design of material for remediation processes ?
- M. Ndjeri, A. Pensel, S. Peulon, V. Haldys, B. Desmazières, A. Chaussé
- Colloid Surface A, 435, 154-169, 2013

11. MgATP regulates allostery and fiber formation in IMPDHs.
- G. Labesse, T. Alexandre, L. Vaupré, I. Salard-Arnaud, J. Lai Kee Him, B. raynal, P. Bron, H. Miner-Lehmann
- Structure, 21(6), 975-985 2013

12. Conical intersection structure and dynamics for a model protonated schiff base photoisomerization in solution.
- J.P. Malhado, R. Spezia, J.T. Hynes
- Int. J. Quantum Chem., 113(3), 296-305, 2013

13. MCMC2 : a Monte Carlo code for multiply-charged clusters.
- D.A. Bonhommeau, M.-P. Gaigeot
- Comput. Phys. Commun., 184(3), 873-884, 2013

14. Lanthanoids(III) and actinoids(III) in water : diffusion coefficients and hydration enthalpies from polarizable molecular dynamics simulations.
- F. Martelli, S. Abadie, J.-P. Simonin, R. Vuilleumier, R. Spezia
- Pure Appl. Chem., 85(1),237-246, 2013

15. Ultrafast damage following radiation-induced oxidation of uracil in aqueous solution.
- P. Lopez-Tarifa, M.-P. Gaigeot, R. Vuilleumier, I. Tavernelli, M. Alcami, F. Martin, M.A. Hervé du Penhoat, M.-F. Politis
- Angew. Chemie. Int., 52, 3160-3163, 2013

16. Liquid methanol from DFT and DFT/MM Molecular Dynamics Simulations.
- N. Sieffert, M. Bühl, M.-P. Gaigeot, C.A. Morrison
- J. Chem. Theory. Comput., 9, 106, 2013

17. VSFG spectrum of the liquid water-vapor interface from Density Functional Theory based Molecular Dynamics Simulations.
- L. Sulpizi, M. Salanne, M. Sprik, M.-P. Gaigeot
- J. Phys. Chem. Lett., 4, 83-87, 2013

18. K-edge XANES investigation of octakis(DMSO)lanthanoid(III) complexes in DMSO solution and solid iodides.
- P. D’Angelo, V. Migliorati, R. Spezia, S .De Panfilis, I. Persson, A. Zitolo
- Phys. Chem. Chem. Phys., 15, 8684-8691,2013

19. Modelling protein-protein recognition in solution using the coarse-grained force-field SCORPION.
- N. Basdevant, D. Borgis, T. Ha-Duong
- J. Chem. Theory Comput., 9, 803-813, 2013

20. Influence of GTP/GDP and magnesium ion on the solvated structure of the protein FtsZ : A Molecular Dynamics Study
- C. Jamous, N. Basdevant, T. Ha-Duong
- J. Biomol. Struc. Dyn. In Press, 2013, DOI : 10.1080/07391102.2013.799436

21. O-H anharmonic vibrational motions in Cl- … (CH3OH)1-2 ionic clusters. Combined IRPD experiments and AIMD simulations.
- J. P. Beck, A. Cimas, J. M. Lisy, M.-P. Gaigeot
- Spectrochim. Acta A, in press, 2013,

22. Experimental and computational thermochemical studies of benzoxazole and two chlorobenzoxadole derivatives.
- A.L. Ribeiro da Silva, A. Cimas, M.D.C. Ribeiro da Silva
- J. Chem. Thermodyn., 57, 212-219, 2013

23. Experimental and computational study of the energetics of hydantoin and 2-thiohydantoin.
- A.L. Silva, A. Cimas, N. Vale, P. Gomes, M.J. Monte, M.D.M.C. Ribeiro da Silva
- J. Chem. Thermodyn., 58, 158-165, 2013

24. Improved performance of anode with Iron/Sulfur-modified graphite in microbial fuel cell.
- L. Bouabdalaoui, L. Legrand, D. Féron, A. Chaussé
- Electrochem. Commun., 28, 1-4, 2013

25. Trace lead analysis based on carbon-screen-printed-electrodes modified via 4-carboxy-phenyl diazonium salt electroreduction.
- S. Bouden, A. Chaussé, S. Dorbes, O. El Tal, N. Bellakhal, M. Dachraoui, C. Vautrin-Ul
- Talanta, 106, 414-421, 2013

26. New one-pot synthesis of Au and Ag nanoparticles using green rust reactive particle as a microreactor.
- S. Ayadi, C. Perca, L. Legrand
- Nanoscale Res. Lett., 8(95), 2013

27. Characterisation of oxygen and hydrogen migration through oxide scales formed on nickel-base alloys in PWR primary medium conditions.
- F. Jambon, L. Marchetti, F. Jomard, J. Chêne
- Solid State Ionics, 231, 69-73, 2013

28. Fluorescent labeling of a bis-urea based supramolecular polymer.
- P. Ribagnac, C. Cannizzo, R. Méallet-Renault, G. Clavier, P. Audebert, R. Pansu, L. Bouteiller
- J. Phys. Chem. B, 117(6), 1958-1966, 2013

29. Novel aliphatic polyesters from an oleic acid based monomer. Synthesis, epoxidation, cross-linking and biodegradation.
- P.-J. Roumanet, F. Laflèche, N. Jarroux, Y. Raoul, S. Claude, P. Guégan
- Eur. Polym. J., 49(4), 813-822, 2013

30. Exploration of neutral versus polyelectrolyte behavior of poly(ethylene glycol)s in alkali ion solutions using single-nanopore recording.
- M.-F. Breton, F. Discala, L. Bacri, D. Foster, J. Pelta, A.G. Oukhaled
- J. Phys. Chem. Lett., 4(13), 2202-2208, 2013

31. Anionic ring-opening polymerization of ethylene oxide in DMF with cyclodextrin derivatives as new initiators.
- C. Huin, Z. Eskandani, N. Badi, A. Farcas, V. Bennevault-Celton, P. Guégan
- Carbohydr. Polym., 94(1), 323-331, 2013

32. Effect of alkali ions on the partitioning of neutral polymers into nanopores : statics and dynamics.
- M.-F. Breton, F. Discala, L. Bacri, D. Foster, J. Pelta, A.G. Oukhaled
- J. Phys. Rev. Lett., 4(13), 2202-2208, 2013

33. Modeling interactions between an amino acid and a metal dication : Cysteine-Calcium(II) reactions in the gas phase.
- M. Hurtado, M. Monte, A.M. Lamsabhi, M. Yanez, O. Mo, J.-Y. Salpin
- CHEMPLUSCHEM, 78(9, Special Issue : SI), 1124-1133, 2013
- DOI : 10.1002/cplu.201300166

34. Capillary zone electrophoresis and capillary electrophoresis-mass spectrometry for analyzing qualitative and quantitative variations in therapeutic albumin.
- A.-L. Marie, C. Przybylski, F. Gonnet, R. Daniel, R. Urbain, G. Chevreux, S. Jorieux, M. Taverna
- Anal. Chim. Acta, 800, 103-110, 2013
- DOI : 10.1016/j.aca.2013.09.023

35. Factorial design optimization of experimental variables in preconcentration of carbamates pesticides in water samples using solid phase extraction and liquid chromatography-electrospray-mass spectrometry determination.
- L. Latrous El Atrache, R. Ben Sghaier, B. Bejaoui Kefi, V. Haldys, M. Dachraoui, J. Tortajada
- Talanta, 117, 392-398, 2013

36. Structural determinants for protein adsorption/non-adsorption to silica surface.
- C. Mathe, S. Devineau, J.-C. Aude, G. Lagniel, S. Chedin, V. Legros, M.-H. Mathon, J.-P. Renault, S. Pin, Y. Boulard, J. Labarre
- PLOS ONE, 8(11), e81346, 2013
- DOI : 10.1371/journal.pone.0081346

37. Anharmonic vibrations of N-H in Cl- (N-methylacetamide)(1)(H2O)(0-2)Ar-2 cluster ions. Combined IRPD experiments and BOMD simulations.
- J.P. Beck, M.-P. Gaigeot, J.M. Lisy
- Phys. Chem. Chem. Phys., 15(39), 16736-16745, 2013
- DOI : 10.1039/c3cp52418c

38. Easy eco-friendly phenonium ion production from phenethyl alcohols in dimethyl carbonate.
- M. Barontini, I.P. Silvestri, V. Nardi, P. Bovicelli, L. Pari, F. Gallucci, R. Spezia, G. Righi
- Tetrahedron Lett., 54(37), 5004-5006, 2013
- DOI : 10.1016/j.tetlet.2013.06.122

39. Hydration properties and ionic radii of Actinide(III) ions in aqueous solution.
- P. D’Angelo, F. Martelli, R. Spezia, A. Filipponi, M.A. Denecke
- Inorg. Chem., 52(18), 10318-10324, 2013
- DOI : 10.1021/ic400678u

40. pK(a) of silicic acid in presence of La3+ using single sweep method coupled to DFT-based molecular dynamics.
- R. Spezia, R. Vuilleumier
- Mol. Phys., 111(22-23, SI), 3478-3485, 2013
- DOI : 10.1080/00268976.2013.848300

41. Six pyranoside forms of free 2-deoxy-D-ribose.
- I. Pena, E.J. Cocinero, C. Cabezas, A. Lesarri, S. Mata, P. Ecija, A.M. Daly, A. Cimas, C. Bermudez, F.J. Basterretxea, S. Blanco, J.A. Fernandez, J.C. Lopez, F. Castano, J.L. Alonso
- Angew. Chemie. Int., 52(45), 11840-11845, 2013
- DOI : 10.1002/anie.201305589

42. Dissociation of HCl into Ions on Wet Hydroxylated (0001) alpha-Quartz.
- G. Murdachaew, M.-P. Gaigeot, L. Halonen, R.B. Gerber
- J. Phys. Chem. Lett., 4(20), 3500-3507, 2013
- DOI : 10.1021/jz4017969

43. Formation of the OOH(.) radical at steps of the boehmite surface and its inhibition by gallic acid : A theoretical study including DFT-based dynamics.
- T. Ribeiro, A. Motta, P. Marcus, M.-P. Gaigeot, X. Lopez, D. Costa
- J. Inorg. Biochem., 128(SI), 164-173, 2013
- DOI : 10.1016/j.jinorgbio.2013.07.024

44. Nanocrystallized SnO2 thin films deposited on Si and LaAlO3 substrates by pulsed-MOCVD technique for electrochemical applications.
- R. Drevet, C. Legros, D. Berardan, P. Ribot, A. Chaussé, M. Andrieux
- Surf. Coat. Tech., 230, 180-185, 2013
- DOI : 10.1016/j.surfcoal.2013.06.033

45. Biomimetic artificial ion channels based on beta-cyclodextrin.
- Y. El Ghoul, R. Renia, I. Faye, S. Rassou, N. Badi, V. Bennevault-Celton, C. Huin, P. Guégan
- Chem. Commun., 49(99), 11647-11649, 2013
- DOI : 10.1039/c3cc47071g

46. Kinetics of enzymatic degradation of high molecular weight polysaccharides through a nanopore : experiments and data-modeling.
- A. Fennouri, R. Daniel, M. Pastoriza-Gallego, L. Auvray, J. Pelta, L. Bacri
- Anal. Chem., 85(8), 8488-8492, 2013
- DOI : 10.1021/ac4020929

47. Effect of Ti/TiN multilayer protective nanocoatings on Zr-based metallic glasses mechanical performance.
- A. Tekaya, T. Benameur, S. Labdi, P. Aubert
- Thin Solid Films, 539, 215-221, 2013
- DOI : 10.1016/j.tsf.2013.05.049

48. Fluorescent labeling of a bisurea-based supramolecular polymer.
- P. Ribagnac, C. Cannizzo, R. Meallet-Renault, G. Clavier, P. Audebert, R. Pansu, L. Bouteiller
- J. Phys. Chem., 117(6), 1958-1966, 2013
- DOI : 10.1021/jp307829x

49. A soft cortex is essential for asymmetric spindle positioning in mouse oocytes.
- A. Chaigne, C. Campillo, N.S. Gov, R. Voituriez, J. Azoury, C. Umana-Diaz, M. Almonacid, I. Queguiner, P. Nassoy, C. Sykes, M.-H. Verlhac, M.-E. Terret
- Nature Cell. Biology, 15(8), 958-966, 2013
- DOI : 10.1038/ncb2799

50. Alpha-Hemolysin membrane pore density measured on liposomes.
- J. Lemiere, K. Guevorkian, C. Campillo, C. Sykes, T. Betz
- Soft Matter., 9(11), 3181-3187, 2013
- DOI : 10.1039/c3sm27812c

Thèses :

- Synthèse de copolymères à bloc appliqué à la thérapie génique.
- Université d’Évry-Val-d’Essonne, 11 janvier 2013
- Directeur de thèse : Philippe Guégan

- Étude de matériaux d’anode à base de graphite modifié par des composés Fer-Soufre : Applications aux piles à combustible microbiennes.
- Université d’Évry-Val-d’Essonne, 16 juillet 2013
- Directeur de thèse : Annie Chaussé, co-encadrant : Ludovic Legrand

Johana MUSSO
- Nouveaux développements pour le couplage entre la Résonance Plasmonique de Surface à imagerie et la Spectrométrie de Masse (SPRi-MS).
- Université d’Évry-Val-d’Essonne, 20 décembre 2013
- Directeur de thèse : Régis Daniel, co-directeur : William Buchmann